Ongoing projects:
- E5 Deep Dive Expression manuscript 
- E5 Timeseries work – need to re-integrate, figure out my role/contribution 
- ceasmallr data analyses 
- SIFP data analyses. 
Big goals for month of October:
- DDE manuscript ready for submission 
- Summary presentation of SIFP work/results, ready for GSS and IZ No Bones talk 
- Masters Thesis Proposal sent to committee 
Goals for first two weeks of October (10/1/25 - 10/17/25)
- DDE manucript draft finished and sent to collaborators for feedback/edits 
- First draft of masters thesis proposal 
- SIFP: - figure out how to re-basecall data using .pod5 files (modified basecalling ofc) 
- figure out workflow (tools, parameters, etc.) for trimming (adapter, barcode, and quality), alignment, and DMR analysis.